Cytoscape Network Chart

Source: R/cytoscape.R

Cytoscape Network Chart

cytoscape(df = NULL, nodes = NULL, edges = NULL, json = NULL,
  id = "id", source = "source", target = "target", message = NULL,
  width = NULL, height = NULL, elementId = NULL)

Arguments

df

data.frame or tibble
nodes

data.frame or tibble
edges

data.frame or tibble
json

pass single json object. This option over-rules all others.
id

character column name where df used
source

character column name where df used
target

character column name where df used
elementId

Examples


 nodes <- data.frame(id = c('a','b'))
 edges <- data.frame(id = 'ab', source = 'a', target = 'b')

 cytoscape(nodes = nodes, edges = edges)